"Our business is defending the believer." Thus spoke Trevor Phillips, chair of the Equality and Human Rights Commission, in an interview with the Daily Telegraph back in June. It was a good soundbite, at least a memorable one, but it has now come back to haunt him.

At the time, Phillips' remarks (he also suggested that religious identity was "an essential part of this society" and "an essential element of being a fulfilled human being") raised fears among secularists. But he also had some tough words for politically motivated Christian activists whose "old time religion" meant that they "want to have a fight and they choose sexual orientation as the ground to fight it on." So the Evangelicals weren't too impressed either. No one was quite sure whether Phillips had been announcing a change of direction, to give more emphasis to religion in the whole equality pick-n-mix, or merely trying to rebut suspicions that his organisation was part of "a fashionable mocking and knocking brigade." Perhaps he wasn't entirely sure himself.

A couple of weeks later, the EHRC announced - via a press release - that it intended to intervene in four cases of religious discrimination which had been rejected by British courts but were going to be heard in Strasbourg. This time, the message was much less ambiguous. "Judges have interpreted the law too narrowly in religion or belief discrimination claims," it began. It went on to accuse the courts of giving "insufficient" protection to freedom of religion or belief and having "set the bar too high for someone to prove that they have been discriminated against because of their religion." They had "created a body of confusing and contradictory case law". The Commission intended to "propose the idea of 'reasonable accommodations' that will help employers and others manage how they allow people to manifest their religion or belief."

Christian campaign groups were predictably delighted. The Evangelical Alliance even took the credit for selling the idea ofreasonable accommodation during its meetings with EHRC staff. Secular and gay rights organisations were (equally predictably) appalled, the latter mainly because two of the cases that the EHRC seemed to be supporting involved people who wished to manifest their religious faith by discriminating against homosexuals. Islington registrar Lillian Ladele wanted the right to avoid officiating at civil partnership ceremonies. Relate counsellor Gary Gary McFarlane didn't want to work with gay couples.

There was a huge row. Andrew Copson of the British Humanist Association accused the commission of lending its support to "a deliberate agenda to stir up support for a re-Christianisation of our public spaces as a reaction to feelings of persecution." Behind the scenes at the commission, it is rumoured, feelings were running high. Publicly, nothing further was said.

It now appears that the EHRC has come to the conclusion that the courts' judgement in the Ladele and Macfarlane cases was right all along. An emergency consultation document which they've just put out in advance of the Strasbourg hearing seeking views announces the organisation's intention to oppose the appeals in those two cases while still supporting dissident cross-wearers Nadia Eweida and Shirley Chaplin.

Whatever the organisation is saying now, this wasn't the impression it gave at the time. Pink News was given to understand that the ECHR's proposal "could involve local councils allowing Christian registrars to swap shifts to avoid having to officiate civil partnerships, rather than beginning disciplinary action which then leads to 'costly, complex legal proceedings'". While the public press release wasn't quite so specific, it did feature the quoted words about the cost of litigation. It also implied that it viewed the four cases as involving essentially the same principle.

The intervention of one commissioner in particular seems to have been decisive. Angela Mason, formerly with Stonewall herself, gave a somewhat outspoken interview to the Pink Paper in which she downplayed the press release: "I don't think it fully represented the opinion of the commission." And she announced (and the consultation document confirms) that the commission "has already decided not to put forward 'reasonable adjustment' arguments if we do continue with our intervention."

Instead, the commission is seeking views on whether the concept of reasonable accommodation "would have any practical useful application." This, after several weeks of mixed messages and in a rushed consultation with a deadline only three weeks hence, suggests that the ECHR is in almost total disarray on the issue. The latest press release tries to reflect the blame onto the appeal process itself, complaining that the court has "only given us a few weeks in which to prepare our submissions" and that the principle of reasonable accommodation "needs more careful consideration."

The consultation document devotes most of its space to setting out the arguments in favour of a principle that the commission states that it nolonger intends to put before the court. At the same time, the September 6th deadline is designed to ensure that interested parties' views can be taken into account before the commission makes its final submissions. This makes no sense. It is explicable only as evidence of unresolved internal disputes.

The EHRC was always an unwieldy beast, dedicated to an official fiction that all rights are equal and that there is no necessary conflict between them. A report for Civitas earlier this month called for the commission to be abolished, suggesting that it "contributes very little to meaningful equality in Britain today" and costs the taxpayer far too much money. This latest saga certainly points to a troubled organisation, uncertain of its role, vainly trying to placate contradictory points of view, and bearing the impression of the last pressure group which sat on it.