Resurrecting dinosaurs with medical scanners and 3D printers

CT scans and 3D printers are making it possible to see fossils that were previously inaccessible inside rock.

Accurate copies of fossilised bones can now be made from the combined use of computed tomography (CT) scans and 3D printers, according to a paper published in the journal Radiology.

The technique offers scientists a non-destructive way of transporting and handling rare or fragile fossils.

To protect such specimens from damage during transportation, the fossils are often stored in plaster jackets or casts. These jackets must be strong enough to protect the fossils, but should also separate easily from the specimen when removed.

It is during the removal of the plaster and surrounding sediment that the fossil is in danger of material loss or even destruction. This typically occurs when the plaster is stuck fast to the bone.

(A 3D print of a fossil (right) next to the original still inside a plaster jacket. Image: Courtesy of Radiology and RSNA)

A group of German researchers found that, by using CT and 3D printers, they could separate fossilised bone from its surrounding sediment matrix in a way that would not harm the specimen, then produce a 3D copy of it.

Applying this method to an unidentified fossil from the Museum für Naturkunde in Berlin, the researchers scanned the bone with a 320-slice multi-detector system to show up the different attenuation (absorption of radiation) through the bone and the surrounding sediment matrix, depicting clearly the fossilised vertebra.

The scan also provided information on the condition and integrity of the specimen, like otherwise unknown fractures, and helped the researchers build an accurate reconstruction of the fossil.

Then using a laser sintering system – a process which uses high-powered lasers to fuse materials by adding thin horizontal layers of plastic – an accurate 3D copy of the fossil was produced.

(An enlarged 3D copy of a 380 million year old coelacanth skull found near Fitzroy Crossing, Western Australia. Image: John Long)

The impact on palaeontology
According to Richard Brian Gunderman, a professor of radiology at Indiana University who was not involved in the study, CT scanners are able to determine the exact structural dimensions of an object, down to fractions of a millimetre.

This data can then be used to construct a replica so precise that objects of great historical interest, like Stradivarius violins, have been created to sound remarkably similar to the originals.

“Such a technology has been a boon to palaeontologists in the past few years,” said John Long, strategic professor in palaeontology at Flinders University.

“Once we relied on meticulous time-consuming methods to prepare delicate fossils out of the rock and, even then, we could only see their external features. Now, using high-resolution micro-CT scanners and synchrotrons [particle accelerators], we can investigate every nook and cranny of the fossil right down to individual cells and tissue structures without having to risk damaging the specimen.

“Combined with advanced 3D printing, we can now slice though the ancient fossil skulls and print them in halves showing the full anatomy in clear definition. This will no doubt revitalise palaeontology.”

(A 3D scan of a 380 million-year-old Gogonasus fish skull by Tim Senden and ANU Vizlab.)

Ahi Sema Issever, from the Charité Campus Mitte in Berlin and one of the study’s authors, explained: “The most important benefit of this method is that it is non-destructive so the risk of harming the fossil is minimal. In addition, not only does this method allow for a global exchange of rare fossils in any quantity, data on the specimens can also be digitally shared between research institutes, museums and schools while protecting the original fossil.”

Darren Curnoe, associate professor at the University of New South Wales, agreed, saying: “Famous fossils like the Taung Child in South Africa - the very first ancient ape-like creature found in our human evolutionary tree - has been quite badly damaged following almost 90 years of study by scientists.

“Almost everyone who sees the fossil wants to take a couple of measurements of their own, and by doing so, is damaging these priceless pieces of our collective heritage. We need to do better, and such technology might just be the answer.”

A note of caution
Although supportive of the technological breakthrough in this study, Professor Long warned that researchers must not rely too heavily on tomographic imagery and 3D printing to draw their conclusions.

“It is important to carefully study the preservational biases of the original fossil first to determine how reliable a computer-generated image will be. In some cases, replacement of bone by other minerals or the presence of solid inclusions can effect the quality of CT images and affect 3D printing results.

“Scientists still need to study the original specimens in detail first, and then make interpretations using CT tomography and 3D printing.”

(A scanned 400 million-year-old placoderm eye capsule found in Taemas near Canberra. Image: Tim Senden)

Associate Professor Curnoe agreed, saying: “Any model made from CT scans must properly distinguish actual bone from missing bone, or even from materials like plaster, that had been used in the past to reconstruct missing bones in the fossils. This is particularly important since most fossils found are incomplete or distorted.

“In the end, there is nothing like seeing the real thing to fully understand the anatomy and the state of preservation of a fossil. But, for the sort of work many scientists do, especially postgraduate students, 3D models would be incredibly useful at a time when funding can be very hard to get.”

Beyond fossils
Some experts speculate that the findings from this study will benefit the medical field, like building and fitting implants in orthopaedic surgery. Others feel that the technique could be used to model real bones and other tissues, such as cadavers that have been preserved in ice or peat bogs.

Martin Baumers, a research fellow at the University of Nottingham, would like to see the implementation of a virtual library and data infrastructure for such 3D data and designs. He believes that it would aid collaborative research, allowing experts from different disciplines to share and retrieve 3D models for 3D printing or other scientific, even commercial, usage.

For Professor Long, the biggest breakthrough will come when palaeontologists possess the ability to make portable machines to take into the field and scan fossils, still buried under the rock layers, to determine the full extent of the fossil before excavating it.

This article was originally published at The Conversation. Read the original article.The Conversation

A scan of a 380million-year-old tooth from a fossil shark. (Image: Tim Sendon)
John Moore
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The man who created the fake Tube sign explains why he did it

"We need to consider the fact that fake news isn't always fake news at the source," says John Moore.

"I wrote that at 8 o'clock on the evening and before midday the next day it had been read out in the Houses of Parliament."

John Moore, a 44-year-old doctor from Windsor, is describing the whirlwind process by which his social media response to Wednesday's Westminster attack became national news.

Moore used a Tube-sign generator on the evening after the attack to create a sign on a TfL Service Announcement board that read: "All terrorists are politely reminded that THIS IS LONDON and whatever you do to us we will drink tea and jolly well carry on thank you." Within three hours, it had just fifty shares. By the morning, it had accumulated 200. Yet by the afternoon, over 30,000 people had shared Moore's post, which was then read aloud on BBC Radio 4 and called a "wonderful tribute" by prime minister Theresa May, who at the time believed it was a genuine Underground sign. 

"I think you have to be very mindful of how powerful the internet is," says Moore, whose viral post was quickly debunked by social media users and then national newspapers such as the Guardian and the Sun. On Thursday, the online world split into two camps: those spreading the word that the sign was "fake news" and urging people not to share it, and those who said that it didn't matter that it was fake - the sentiment was what was important. 

Moore agrees with the latter camp. "I never claimed it was a real tube sign, I never claimed that at all," he says. "In my opinion the only fake news about that sign is that it has been reported as fake news. It was literally just how I was feeling at the time."

Moore was motivated to create and post the sign when he was struck by the "very British response" to the Westminster attack. "There was no sort of knee-jerk Islamaphobia, there was no dramatisation, it was all pretty much, I thought, very calm reporting," he says. "So my initial thought at the time was just a bit of pride in how London had reacted really." Though he saw other, real Tube signs online, he wanted to create his own in order to create a tribute that specifically epitomised the "very London" response. 

Yet though Moore insists he never claimed the sign was real, his caption on the image - which now has 100,800 shares - is arguably misleading. "Quintessentially British..." Moore wrote on his Facebook post, and agrees now that this was ambiguous. "It was meant to relate to the reaction that I saw in London in that day which I just thought was very calm and measured. What the sign was trying to do was capture the spirit I'd seen, so that's what I was actually talking about."

Not only did Moore not mean to mislead, he is actually shocked that anyone thought the sign was real. 

"I'm reasonably digitally savvy and I was extremely shocked that anyone thought it was real," he says, explaining that he thought everyone would be able to spot a fake after a "You ain't no muslim bruv" sign went viral after the Leytonstone Tube attack in 2015. "I thought this is an internet meme that people know isn't true and it's fine to do because this is a digital thing in a digital world."

Yet despite his intentions, Moore's sign has become the centre of debate about whether "nice" fake news is as problematic as that which was notoriously spread during the 2016 United States Presidential elections. Though Moore can understand this perspective, he ultimately feels as though the sentiment behind the sign makes it acceptable. 

"I use the word fake in inverted commas because I think fake implies the intention to deceive and there wasn't [any]... I think if the sentiment is ok then I think it is ok. I think if you were trying to be divisive and you were trying to stir up controversy or influence people's behaviour then perhaps I wouldn't have chosen that forum but I think when you're only expressing your own emotion, I think it's ok.

"The fact that it became so-called fake news was down to other people's interpretation and not down to the actual intention... So in many interesting ways you can see that fake news doesn't even have to originate from the source of the news."

Though Moore was initially "extremely shocked" at the reponse to his post, he says that on reflection he is "pretty proud". 

"I'm glad that other people, even the powers that be, found it an appropriate phrase to use," he says. "I also think social media is often denigrated as a source of evil and bad things in the world, but on occasion I think it can be used for very positive things. I think the vast majority of people who shared my post and liked my post have actually found the phrase and the sentiment useful to them, so I think we have to give social media a fair judgement at times and respect the fact it can be a source for good."

Amelia Tait is a technology and digital culture writer at the New Statesman.