Resurrecting dinosaurs with medical scanners and 3D printers

CT scans and 3D printers are making it possible to see fossils that were previously inaccessible inside rock.

Accurate copies of fossilised bones can now be made from the combined use of computed tomography (CT) scans and 3D printers, according to a paper published in the journal Radiology.

The technique offers scientists a non-destructive way of transporting and handling rare or fragile fossils.

To protect such specimens from damage during transportation, the fossils are often stored in plaster jackets or casts. These jackets must be strong enough to protect the fossils, but should also separate easily from the specimen when removed.

It is during the removal of the plaster and surrounding sediment that the fossil is in danger of material loss or even destruction. This typically occurs when the plaster is stuck fast to the bone.

(A 3D print of a fossil (right) next to the original still inside a plaster jacket. Image: Courtesy of Radiology and RSNA)

A group of German researchers found that, by using CT and 3D printers, they could separate fossilised bone from its surrounding sediment matrix in a way that would not harm the specimen, then produce a 3D copy of it.

Applying this method to an unidentified fossil from the Museum für Naturkunde in Berlin, the researchers scanned the bone with a 320-slice multi-detector system to show up the different attenuation (absorption of radiation) through the bone and the surrounding sediment matrix, depicting clearly the fossilised vertebra.

The scan also provided information on the condition and integrity of the specimen, like otherwise unknown fractures, and helped the researchers build an accurate reconstruction of the fossil.

Then using a laser sintering system – a process which uses high-powered lasers to fuse materials by adding thin horizontal layers of plastic – an accurate 3D copy of the fossil was produced.

(An enlarged 3D copy of a 380 million year old coelacanth skull found near Fitzroy Crossing, Western Australia. Image: John Long)

The impact on palaeontology
According to Richard Brian Gunderman, a professor of radiology at Indiana University who was not involved in the study, CT scanners are able to determine the exact structural dimensions of an object, down to fractions of a millimetre.

This data can then be used to construct a replica so precise that objects of great historical interest, like Stradivarius violins, have been created to sound remarkably similar to the originals.

“Such a technology has been a boon to palaeontologists in the past few years,” said John Long, strategic professor in palaeontology at Flinders University.

“Once we relied on meticulous time-consuming methods to prepare delicate fossils out of the rock and, even then, we could only see their external features. Now, using high-resolution micro-CT scanners and synchrotrons [particle accelerators], we can investigate every nook and cranny of the fossil right down to individual cells and tissue structures without having to risk damaging the specimen.

“Combined with advanced 3D printing, we can now slice though the ancient fossil skulls and print them in halves showing the full anatomy in clear definition. This will no doubt revitalise palaeontology.”

(A 3D scan of a 380 million-year-old Gogonasus fish skull by Tim Senden and ANU Vizlab.)

Ahi Sema Issever, from the Charité Campus Mitte in Berlin and one of the study’s authors, explained: “The most important benefit of this method is that it is non-destructive so the risk of harming the fossil is minimal. In addition, not only does this method allow for a global exchange of rare fossils in any quantity, data on the specimens can also be digitally shared between research institutes, museums and schools while protecting the original fossil.”

Darren Curnoe, associate professor at the University of New South Wales, agreed, saying: “Famous fossils like the Taung Child in South Africa - the very first ancient ape-like creature found in our human evolutionary tree - has been quite badly damaged following almost 90 years of study by scientists.

“Almost everyone who sees the fossil wants to take a couple of measurements of their own, and by doing so, is damaging these priceless pieces of our collective heritage. We need to do better, and such technology might just be the answer.”

A note of caution
Although supportive of the technological breakthrough in this study, Professor Long warned that researchers must not rely too heavily on tomographic imagery and 3D printing to draw their conclusions.

“It is important to carefully study the preservational biases of the original fossil first to determine how reliable a computer-generated image will be. In some cases, replacement of bone by other minerals or the presence of solid inclusions can effect the quality of CT images and affect 3D printing results.

“Scientists still need to study the original specimens in detail first, and then make interpretations using CT tomography and 3D printing.”

(A scanned 400 million-year-old placoderm eye capsule found in Taemas near Canberra. Image: Tim Senden)

Associate Professor Curnoe agreed, saying: “Any model made from CT scans must properly distinguish actual bone from missing bone, or even from materials like plaster, that had been used in the past to reconstruct missing bones in the fossils. This is particularly important since most fossils found are incomplete or distorted.

“In the end, there is nothing like seeing the real thing to fully understand the anatomy and the state of preservation of a fossil. But, for the sort of work many scientists do, especially postgraduate students, 3D models would be incredibly useful at a time when funding can be very hard to get.”

Beyond fossils
Some experts speculate that the findings from this study will benefit the medical field, like building and fitting implants in orthopaedic surgery. Others feel that the technique could be used to model real bones and other tissues, such as cadavers that have been preserved in ice or peat bogs.

Martin Baumers, a research fellow at the University of Nottingham, would like to see the implementation of a virtual library and data infrastructure for such 3D data and designs. He believes that it would aid collaborative research, allowing experts from different disciplines to share and retrieve 3D models for 3D printing or other scientific, even commercial, usage.

For Professor Long, the biggest breakthrough will come when palaeontologists possess the ability to make portable machines to take into the field and scan fossils, still buried under the rock layers, to determine the full extent of the fossil before excavating it.

This article was originally published at The Conversation. Read the original article.The Conversation

A scan of a 380million-year-old tooth from a fossil shark. (Image: Tim Sendon)
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Don’t shoot the messenger: are social media giants really “consciously failing” to tackle extremism?

MPs today accused social media companies of failing to combat terrorism, but just how accurate is this claim? 

Today’s home affairs committee report, which said that internet giants such as Twitter, Facebook, and YouTube are “consciously failing” to combat extremism, was criticised by terrorism experts almost immediately.

“Blaming Facebook, Google or Twitter for this phenomenon is quite simplistic, and I'd even say misleading,” Professor Peter Neumann, an expert on radicalisation from Kings College London, told the BBC.

“Social media companies are doing a lot more now than they used to - no doubt because of public pressure,” he went on. The report, however, labels the 14 million videos Google have removed in the last two years, and the 125,000 accounts Twitter has suspended in the last one, a “drop in the ocean”.

It didn’t take long for the sites involved to refute the claims, which follow a 12-month inquiry on radicalisation. A Facebook spokesperson said they deal “swiftly and robustly with reports of terrorism-related content”, whilst YouTube said they take their role in combating the spread of extremism “very seriously”. This time last week, Twitter announced that they’d suspended 235,000 accounts for promoting terrorism in the last six months, which is incidentally after the committee stopped counting in February.

When it comes to numbers, it’s difficult to determine what is and isn’t enough. There is no magical number of Terrorists On The Internet that experts can compare the number of deletions to. But it’s also important to judge the companies’ efforts within the realm of what is actually possible.

“The argument is that because Facebook and Twitter are very good at taking down copyright claims they should be better at tackling extremism,” says Jamie Bartlett, Director of the Centre for the Analysis of Social Media at Demos.

“But in those cases you are given a hashed file by the copyright holder and they say: ‘Find this file on your database and remove it please’. This is very different from extremism. You’re talking about complicated nuanced linguistic patterns each of which are usually unique, and are very hard for an algorithm to determine.”

Bartlett explains that a large team of people would have to work on building this algorithm by trawling through cases of extremist language, which, as Thangam Debonnaire learned this month, even humans can struggle to identify.  

“The problem is when you’re dealing with linguistic patterns even the best algorithms work at 70 per cent accuracy. You’d have so many false positives, and you’d end up needing to have another huge team of people that would be checking all of it. It’s such a much harder task than people think.”

Finding and deleting terrorist content is also only half of the battle. When it comes to videos and images, thousands of people could have downloaded them before they were deleted. During his research, Bartlett has also discovered that when one extremist account is deleted, another inevitably pops up in its place.

“Censorship is close to impossible,” he wrote in a Medium post in February. “I’ve been taking a look at how ISIL are using Twitter. I found one user name, @xcxcx162, who had no less than twenty-one versions of his name, all lined up and ready to use (@xcxcx1627; @xcxcx1628, @xcxcx1629, and so on).”

Beneath all this, there might be another, fundamental flaw in the report’s assumptions. Demos argue that there is no firm evidence that online material actually radicalises people, and that much of the material extremists view and share is often from mainstream news outlets.

But even if total censorship was possible, that doesn’t necessarily make it desirable. Bartlett argues that deleting extreme content would diminish our critical faculties, and that exposing people to it allows them to see for themselves that terrorists are “narcissistic, murderous, thuggish, irreligious brutes.” Complete censorship would also ruin social media for innocent people.

“All the big social media platforms operate on a very important principal, which is that they are not responsible for the content that is placed on their platforms,” he says. “It rests with the user because if they were legally responsible for everything that’s on their platform – and this is a legal ruling in the US – they would have to check every single thing before it was posted. Given that Facebook deals with billions of posts a day that would be the end of the entire social media infrastructure.

“That’s the kind of trade off we’d be talking about here. The benefits of those platforms are considerable and you’d be punishing a lot of innocent people.”

No one is denying that social media companies should do as much as they can to tackle terrorism. Bartlett thinks that platforms can do more to remove information under warrant or hand over data when the police require it, and making online policing 24/7 is an important development “because terrorists do not work 9 to 5”. At the end of the day, however, it’s important for the government to accept technological limitations.

“Censorship of the internet is only going to get harder and harder,” he says. “Our best hope is that people are critical and discerning and that is where I would like the effort to be.” 

Amelia Tait is a technology and digital culture writer at the New Statesman.