Resurrecting dinosaurs with medical scanners and 3D printers

CT scans and 3D printers are making it possible to see fossils that were previously inaccessible inside rock.

Accurate copies of fossilised bones can now be made from the combined use of computed tomography (CT) scans and 3D printers, according to a paper published in the journal Radiology.

The technique offers scientists a non-destructive way of transporting and handling rare or fragile fossils.

To protect such specimens from damage during transportation, the fossils are often stored in plaster jackets or casts. These jackets must be strong enough to protect the fossils, but should also separate easily from the specimen when removed.

It is during the removal of the plaster and surrounding sediment that the fossil is in danger of material loss or even destruction. This typically occurs when the plaster is stuck fast to the bone.

(A 3D print of a fossil (right) next to the original still inside a plaster jacket. Image: Courtesy of Radiology and RSNA)

A group of German researchers found that, by using CT and 3D printers, they could separate fossilised bone from its surrounding sediment matrix in a way that would not harm the specimen, then produce a 3D copy of it.

Applying this method to an unidentified fossil from the Museum für Naturkunde in Berlin, the researchers scanned the bone with a 320-slice multi-detector system to show up the different attenuation (absorption of radiation) through the bone and the surrounding sediment matrix, depicting clearly the fossilised vertebra.

The scan also provided information on the condition and integrity of the specimen, like otherwise unknown fractures, and helped the researchers build an accurate reconstruction of the fossil.

Then using a laser sintering system – a process which uses high-powered lasers to fuse materials by adding thin horizontal layers of plastic – an accurate 3D copy of the fossil was produced.

(An enlarged 3D copy of a 380 million year old coelacanth skull found near Fitzroy Crossing, Western Australia. Image: John Long)

The impact on palaeontology
According to Richard Brian Gunderman, a professor of radiology at Indiana University who was not involved in the study, CT scanners are able to determine the exact structural dimensions of an object, down to fractions of a millimetre.

This data can then be used to construct a replica so precise that objects of great historical interest, like Stradivarius violins, have been created to sound remarkably similar to the originals.

“Such a technology has been a boon to palaeontologists in the past few years,” said John Long, strategic professor in palaeontology at Flinders University.

“Once we relied on meticulous time-consuming methods to prepare delicate fossils out of the rock and, even then, we could only see their external features. Now, using high-resolution micro-CT scanners and synchrotrons [particle accelerators], we can investigate every nook and cranny of the fossil right down to individual cells and tissue structures without having to risk damaging the specimen.

“Combined with advanced 3D printing, we can now slice though the ancient fossil skulls and print them in halves showing the full anatomy in clear definition. This will no doubt revitalise palaeontology.”

(A 3D scan of a 380 million-year-old Gogonasus fish skull by Tim Senden and ANU Vizlab.)

Ahi Sema Issever, from the Charité Campus Mitte in Berlin and one of the study’s authors, explained: “The most important benefit of this method is that it is non-destructive so the risk of harming the fossil is minimal. In addition, not only does this method allow for a global exchange of rare fossils in any quantity, data on the specimens can also be digitally shared between research institutes, museums and schools while protecting the original fossil.”

Darren Curnoe, associate professor at the University of New South Wales, agreed, saying: “Famous fossils like the Taung Child in South Africa - the very first ancient ape-like creature found in our human evolutionary tree - has been quite badly damaged following almost 90 years of study by scientists.

“Almost everyone who sees the fossil wants to take a couple of measurements of their own, and by doing so, is damaging these priceless pieces of our collective heritage. We need to do better, and such technology might just be the answer.”

A note of caution
Although supportive of the technological breakthrough in this study, Professor Long warned that researchers must not rely too heavily on tomographic imagery and 3D printing to draw their conclusions.

“It is important to carefully study the preservational biases of the original fossil first to determine how reliable a computer-generated image will be. In some cases, replacement of bone by other minerals or the presence of solid inclusions can effect the quality of CT images and affect 3D printing results.

“Scientists still need to study the original specimens in detail first, and then make interpretations using CT tomography and 3D printing.”

(A scanned 400 million-year-old placoderm eye capsule found in Taemas near Canberra. Image: Tim Senden)

Associate Professor Curnoe agreed, saying: “Any model made from CT scans must properly distinguish actual bone from missing bone, or even from materials like plaster, that had been used in the past to reconstruct missing bones in the fossils. This is particularly important since most fossils found are incomplete or distorted.

“In the end, there is nothing like seeing the real thing to fully understand the anatomy and the state of preservation of a fossil. But, for the sort of work many scientists do, especially postgraduate students, 3D models would be incredibly useful at a time when funding can be very hard to get.”

Beyond fossils
Some experts speculate that the findings from this study will benefit the medical field, like building and fitting implants in orthopaedic surgery. Others feel that the technique could be used to model real bones and other tissues, such as cadavers that have been preserved in ice or peat bogs.

Martin Baumers, a research fellow at the University of Nottingham, would like to see the implementation of a virtual library and data infrastructure for such 3D data and designs. He believes that it would aid collaborative research, allowing experts from different disciplines to share and retrieve 3D models for 3D printing or other scientific, even commercial, usage.

For Professor Long, the biggest breakthrough will come when palaeontologists possess the ability to make portable machines to take into the field and scan fossils, still buried under the rock layers, to determine the full extent of the fossil before excavating it.

This article was originally published at The Conversation. Read the original article.The Conversation

A scan of a 380million-year-old tooth from a fossil shark. (Image: Tim Sendon)
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A quote-by-quote analysis of how little Jeremy Hunt understands technology

Can social media giants really implement the health secretary’s sexting suggestions? 

In today’s “Did we do something wrong? No, it was social media” news, Health Secretary Jeremy Hunt has argued that technology companies need to do more to prevent sexting and cyber-bullying.

Hunt, whose job it is to help reduce the teenage suicide rate, argued that the onus for reducing the teenage suicide rate should fall on social media companies such as Facebook and Twitter.

Giving evidence to the Commons Health Committee on suicide prevention, Hunt said: “I think social media companies need to step up to the plate and show us how they can be the solution to the issue of mental ill health amongst teenagers, and not the cause of the problem.”

Pause for screaming and/or tearing out of hair.

Don’t worry though; Hunt wasn’t simply trying to pass the buck, despite the committee suggesting he direct more resources to suicide prevention, as he offered extremely well-thought out technological solutions that are in no way inferior to providing better sex education for children. Here’s a quote-by-quote analysis of just how technologically savvy Hunt is.

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“I just ask myself the simple question as to why it is that you can’t prevent the texting of sexually explicit images by people under the age of 18…”

Here’s Hunt asking himself a question that he should be asking the actual experts, which is in no way a waste of anybody’s time at all.

“… If that’s a lock that parents choose to put on a mobile phone contract…”

A lock! But of course. But what should we lock, Jeremy? Should teenager’s phones come with a ban on all social media apps, and for good measure, a block on the use of the camera app itself? It’s hard to see how this would lead to the use of dubious applications that have significantly less security than giants such as Facebook and Snapchat. Well done.

“Because there is technology that can identify sexually explicit pictures and prevent it being transmitted.”

Erm, is there? Image recognition technology does exist, but it’s incredibly complex and expensive, and companies often rely on other information (such as URLs, tags, and hashes) to filter out and identify explicit images. In addition, social media sites like Facebook rely on their users to click the button that identifies an image as an abuse of their guidelines, and then have a human team that look through reported images. The technology is simply unable to identify individual and unique images that teenagers take of their own bodies, and the idea of a human team tackling the job is preposterous. 

But suppose the technology did exist that could flawlessly scan a picture for fleshy bits and bobs? As a tool to prevent sexting, this still is extremely flawed. What if two teens were trying to message one another Titian’s Venus for art or history class? In September, Facebook itself was forced to U-turn after removing the historical “napalm girl” photo from the site.

As for the second part of Jezza’s suggestion, if you can’t identify it, you can’t block it. Facebook Messenger already blocks you from sending pornographic links, but this again relies on analysis of the URLs rather than the content within them. Other messaging services, such as Whatsapp, offer end-to-end encryption (EE2E), meaning – most likely to Hunt’s chagrin – the messages sent on them are not stored nor easily accessed by the government.

“I ask myself why we can’t identify cyberbullying when it happens on social media platforms by word pattern recognition, and then prevent it happening.”

Jeremy, Jeremy, Jeremy, Jeremy, can’t you spot your problem yet? You’ve got to stop asking yourself!

There is simply no algorithm yet intelligent enough to identify bullying language. Why? Because we call our best mate “dickhead” and our worst enemy “pal”. Human language and meaning is infinitely complex, and scanning for certain words would almost definitely lead to false positives. As Labour MP Thangam Debbonaire famously learned this year, even humans can’t always identify whether language is offensive, so what chance does an algorithm stand?

(Side note: It is also amusing to imagine that Hunt could even begin to keep up with teenage slang in this scenario.)

Many also argue that because social media sites can remove copyrighted files efficiently, they should get better at removing abusive language. This is a flawed argument because it is easy to search for a specific file (copyright holders will often send social media giants hashed files which they can then search for on their databases) whereas (for the reasons outlined above) it is exceptionally difficult for algorithms to accurately identify the true meaning of language.

“I think there are a lot of things where social media companies could put options in their software that could reduce the risks associated with social media, and I do think that is something which they should actively pursue in a way that hasn’t happened to date.”

Leaving aside the fact that social media companies constantly come up with solutions for these problems, Hunt has left us with the burning question of whether any of this is even desirable at all.

Why should he prevent under-18s from sexting when the age of consent in the UK is 16? Where has this sudden moral panic about pornography come from? Are the government laying the ground for mass censorship? If two consenting teenagers want to send each other these aubergine emoji a couple of times a week, why should we stop them? Is it not up to parents, rather than the government, to survey and supervise their children’s online activities? Would education, with all of this in mind, not be the better option? Won't somebody please think of the children? 

“There is a lot of evidence that the technology industry, if they put their mind to it, can do really smart things.

Alas, if only we could say the same for you Mr Hunt.

Amelia Tait is a technology and digital culture writer at the New Statesman.